Poster De Conférence Année : 2024

Integration of variation data through SPARQL Micro-Services

Résumé

Integrating genetic variations data is essential to understand the interactions involving multiple genes in complex diseases. However, managing and extracting meaningful information from a large volume of genotyping data is challenging. This work aims to interconnect efficiently a MongoDB database with an RDF database through SPARQL Micro-Services. We first developed an RDF Model reusing existing ontologies and implemented it. Then, we evaluated some examples of queries interconnecting two applications Gigwa (MongoDB) and AgroLD (SPARQL endpoint).

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Dates et versions

ird-04812730 , version 1 (30-11-2024)

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  • HAL Id : ird-04812730 , version 1

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Frederic Metereau, Franck Michel, PIERRE LARMANDE, Guilhem Sempere, Catherine Faron. Integration of variation data through SPARQL Micro-Services. Semantic Web for Health Care and Life Science (SWA4HCLS), Feb 2024, Leiden (DE), Netherlands. ⟨ird-04812730⟩
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