Integration of variation data through SPARQL Micro-Services
Résumé
Integrating genetic variations data is essential to understand the interactions involving multiple genes in complex diseases. However, managing and extracting meaningful information from a large volume of genotyping data is challenging. This work aims to interconnect efficiently a MongoDB database with an RDF database through SPARQL Micro-Services. We first developed an RDF Model reusing existing ontologies and implemented it. Then, we evaluated some examples of queries interconnecting two applications Gigwa (MongoDB) and AgroLD (SPARQL endpoint).
Origine | Fichiers produits par l'(les) auteur(s) |
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