Species delimitation algorithms applied to a large CO1 barcode dataset of lanternfish Diaphus spp - IRD - Institut de recherche pour le développement Access content directly
Reports (Research Report) Year : 2022

Species delimitation algorithms applied to a large CO1 barcode dataset of lanternfish Diaphus spp

Abstract

Here, we present a maximum-likelihood tree of 627 partial CO1 gene sequences of lanternfish, Diaphus spp., including 198 new sequences from the Tropical Southwestern Pacific marine bioregion. The tree is in ultrametric format, against which we present the results of species delimitation using the ABGD, GMYC, PTP and mPTP algorithms. Sixty operational taxonomic units or "species" were determined, of which 25 included haplotypes newly sampled from the Tropical Southwestern Pacific.
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Avant la publication
Saturday, February 8, 2025
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Saturday, February 8, 2025
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Dates and versions

ird-03634906 , version 1 (08-04-2022)

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  • HAL Id : ird-03634906 , version 1

Cite

Laurent Millet, Damien Lagrange, Philippe Borsa. Species delimitation algorithms applied to a large CO1 barcode dataset of lanternfish Diaphus spp. [Research Report] Institut de recherche pour le déveoppement. 2022. ⟨ird-03634906⟩

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